Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548559: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318354' containing sample 'VET0354R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 852.2M bases, 390.6Mb downloads

UUID: 2d841587-bf08-47fe-85f6-9b9419c9cdc8

Design: Illumina sequencing of Staphylococcus aureus VET0354R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228696 • SRP045027 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0354R

SAMN02404188 • SRS616387 • All experiments • All runs

Organism: Staphylococcus aureus VET0354R

Library:

Name: Pond-318354

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470083.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8S5

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55128

research_project: RP-513

root_sample_id: SM-4PMUN

sample_id: SM-5C8S5

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 852.2M bases, 390.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293674	2,114,155	427.1M	195.6Mb	2014-05-21
SRR1531014	2,104,670	425.1M	195.1Mb	2014-07-28

ID:: 785517

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